Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-2865 | -6.598e+03 | 0.0000 | 1985.0 | 51.50% | 150.5 | 0.95% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-2148 | -4.948e+03 | 0.0000 | 1852.0 | 48.05% | 264.5 | 1.67% | motif file (matrix) |
svg |
3 |
| HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer | 1e-70 | -1.619e+02 | 0.0000 | 1281.0 | 33.24% | 3301.3 | 20.89% | motif file (matrix) |
svg |
4 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-45 | -1.056e+02 | 0.0000 | 1613.0 | 41.85% | 4887.8 | 30.92% | motif file (matrix) |
svg |
5 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-42 | -9.797e+01 | 0.0000 | 533.0 | 13.83% | 1168.8 | 7.39% | motif file (matrix) |
svg |
6 |
| Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer | 1e-34 | -8.032e+01 | 0.0000 | 509.0 | 13.21% | 1175.7 | 7.44% | motif file (matrix) |
svg |
7 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-30 | -6.987e+01 | 0.0000 | 400.0 | 10.38% | 888.9 | 5.62% | motif file (matrix) |
svg |
8 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-27 | -6.380e+01 | 0.0000 | 1950.0 | 50.60% | 6604.9 | 41.79% | motif file (matrix) |
svg |
9 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-24 | -5.711e+01 | 0.0000 | 840.0 | 21.80% | 2441.6 | 15.45% | motif file (matrix) |
svg |
10 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-23 | -5.407e+01 | 0.0000 | 362.0 | 9.39% | 847.6 | 5.36% | motif file (matrix) |
svg |
11 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-20 | -4.750e+01 | 0.0000 | 909.0 | 23.59% | 2777.9 | 17.58% | motif file (matrix) |
svg |
12 |
| THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer | 1e-16 | -3.808e+01 | 0.0000 | 364.0 | 9.44% | 946.7 | 5.99% | motif file (matrix) |
svg |
13 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-15 | -3.543e+01 | 0.0000 | 241.0 | 6.25% | 567.3 | 3.59% | motif file (matrix) |
svg |
14 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-15 | -3.527e+01 | 0.0000 | 497.0 | 12.90% | 1418.7 | 8.98% | motif file (matrix) |
svg |
15 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-15 | -3.480e+01 | 0.0000 | 169.0 | 4.39% | 353.3 | 2.24% | motif file (matrix) |
svg |
16 |
| Fos(bZIP)/TSC-Fos-ChIP-Seq(GSE110950)/Homer | 1e-14 | -3.351e+01 | 0.0000 | 283.0 | 7.34% | 711.6 | 4.50% | motif file (matrix) |
svg |
17 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-14 | -3.284e+01 | 0.0000 | 838.0 | 21.74% | 2672.5 | 16.91% | motif file (matrix) |
svg |
18 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-14 | -3.263e+01 | 0.0000 | 519.0 | 13.47% | 1518.9 | 9.61% | motif file (matrix) |
svg |
19 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-13 | -3.108e+01 | 0.0000 | 270.0 | 7.01% | 684.6 | 4.33% | motif file (matrix) |
svg |
20 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-13 | -3.073e+01 | 0.0000 | 265.0 | 6.88% | 670.7 | 4.24% | motif file (matrix) |
svg |
21 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-12 | -2.930e+01 | 0.0000 | 1019.0 | 26.44% | 3398.7 | 21.50% | motif file (matrix) |
svg |
22 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-12 | -2.925e+01 | 0.0000 | 689.0 | 17.88% | 2164.2 | 13.69% | motif file (matrix) |
svg |
23 |
| GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer | 1e-11 | -2.709e+01 | 0.0000 | 882.0 | 22.89% | 2909.9 | 18.41% | motif file (matrix) |
svg |
24 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-11 | -2.699e+01 | 0.0000 | 301.0 | 7.81% | 814.9 | 5.16% | motif file (matrix) |
svg |
25 |
| Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer | 1e-11 | -2.628e+01 | 0.0000 | 264.0 | 6.85% | 696.8 | 4.41% | motif file (matrix) |
svg |
26 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-10 | -2.446e+01 | 0.0000 | 300.0 | 7.78% | 830.8 | 5.26% | motif file (matrix) |
svg |
27 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-10 | -2.372e+01 | 0.0000 | 116.0 | 3.01% | 245.6 | 1.55% | motif file (matrix) |
svg |
28 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-10 | -2.337e+01 | 0.0000 | 1236.0 | 32.07% | 4327.4 | 27.38% | motif file (matrix) |
svg |
29 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-9 | -2.090e+01 | 0.0000 | 320.0 | 8.30% | 929.9 | 5.88% | motif file (matrix) |
svg |
30 |
| PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer | 1e-8 | -1.915e+01 | 0.0000 | 213.0 | 5.53% | 578.3 | 3.66% | motif file (matrix) |
svg |
31 |
| TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer | 1e-7 | -1.794e+01 | 0.0000 | 669.0 | 17.36% | 2237.4 | 14.16% | motif file (matrix) |
svg |
32 |
| Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer | 1e-7 | -1.786e+01 | 0.0000 | 758.0 | 19.67% | 2575.1 | 16.29% | motif file (matrix) |
svg |
33 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-7 | -1.775e+01 | 0.0000 | 1487.0 | 38.58% | 5426.3 | 34.33% | motif file (matrix) |
svg |
34 |
| BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer | 1e-7 | -1.765e+01 | 0.0000 | 617.0 | 16.01% | 2046.8 | 12.95% | motif file (matrix) |
svg |
35 |
| Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer | 1e-7 | -1.762e+01 | 0.0000 | 1231.0 | 31.94% | 4413.4 | 27.92% | motif file (matrix) |
svg |
36 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-7 | -1.736e+01 | 0.0000 | 1642.0 | 42.61% | 6056.8 | 38.32% | motif file (matrix) |
svg |
37 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-6 | -1.447e+01 | 0.0000 | 752.0 | 19.51% | 2610.3 | 16.51% | motif file (matrix) |
svg |
38 |
| LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer | 1e-6 | -1.423e+01 | 0.0000 | 713.0 | 18.50% | 2465.9 | 15.60% | motif file (matrix) |
svg |
39 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-5 | -1.356e+01 | 0.0000 | 475.0 | 12.32% | 1576.4 | 9.97% | motif file (matrix) |
svg |
40 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-5 | -1.325e+01 | 0.0000 | 291.0 | 7.55% | 906.0 | 5.73% | motif file (matrix) |
svg |
41 |
| RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-5 | -1.181e+01 | 0.0001 | 295.0 | 7.65% | 937.2 | 5.93% | motif file (matrix) |
svg |
42 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-5 | -1.161e+01 | 0.0001 | 915.0 | 23.74% | 3300.2 | 20.88% | motif file (matrix) |
svg |
43 |
| Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer | 1e-4 | -1.120e+01 | 0.0001 | 324.0 | 8.41% | 1051.4 | 6.65% | motif file (matrix) |
svg |
44 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-4 | -1.089e+01 | 0.0002 | 635.0 | 16.48% | 2229.6 | 14.11% | motif file (matrix) |
svg |
45 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-4 | -1.064e+01 | 0.0002 | 83.0 | 2.15% | 210.3 | 1.33% | motif file (matrix) |
svg |
46 |
| STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer | 1e-4 | -1.024e+01 | 0.0003 | 132.0 | 3.43% | 376.0 | 2.38% | motif file (matrix) |
svg |
47 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-4 | -9.744e+00 | 0.0005 | 321.0 | 8.33% | 1062.0 | 6.72% | motif file (matrix) |
svg |
48 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-3 | -9.051e+00 | 0.0011 | 1209.0 | 31.37% | 4529.3 | 28.66% | motif file (matrix) |
svg |
49 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-3 | -8.860e+00 | 0.0013 | 359.0 | 9.31% | 1217.9 | 7.71% | motif file (matrix) |
svg |
50 |
| EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer | 1e-3 | -8.076e+00 | 0.0027 | 376.0 | 9.76% | 1295.3 | 8.20% | motif file (matrix) |
svg |
51 |
| ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer | 1e-3 | -7.832e+00 | 0.0034 | 243.0 | 6.31% | 801.0 | 5.07% | motif file (matrix) |
svg |
52 |
| Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer | 1e-3 | -7.738e+00 | 0.0037 | 82.0 | 2.13% | 227.7 | 1.44% | motif file (matrix) |
svg |
53 |
| Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer | 1e-3 | -7.589e+00 | 0.0042 | 550.0 | 14.27% | 1972.3 | 12.48% | motif file (matrix) |
svg |
54 |
| Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer | 1e-3 | -7.332e+00 | 0.0053 | 470.0 | 12.20% | 1669.0 | 10.56% | motif file (matrix) |
svg |
55 |
| STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer | 1e-3 | -7.210e+00 | 0.0059 | 231.0 | 5.99% | 766.7 | 4.85% | motif file (matrix) |
svg |
56 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.064e+00 | 0.0067 | 713.0 | 18.50% | 2621.9 | 16.59% | motif file (matrix) |
svg |
57 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-3 | -7.043e+00 | 0.0067 | 392.0 | 10.17% | 1376.5 | 8.71% | motif file (matrix) |
svg |
58 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-2 | -6.374e+00 | 0.0129 | 341.0 | 8.85% | 1195.2 | 7.56% | motif file (matrix) |
svg |
59 |
| NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer | 1e-2 | -6.345e+00 | 0.0131 | 391.0 | 10.15% | 1387.1 | 8.78% | motif file (matrix) |
svg |
60 |
| TATA-Box(TBP)/Promoter/Homer | 1e-2 | -6.281e+00 | 0.0137 | 583.0 | 15.13% | 2133.4 | 13.50% | motif file (matrix) |
svg |
61 |
| NFE2L2(bZIP)/HepG2-NFE2L2-ChIP-Seq(Encode)/Homer | 1e-2 | -6.140e+00 | 0.0155 | 22.0 | 0.57% | 45.1 | 0.29% | motif file (matrix) |
svg |
62 |
| Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer | 1e-2 | -5.826e+00 | 0.0209 | 396.0 | 10.28% | 1418.8 | 8.98% | motif file (matrix) |
svg |
63 |
| SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer | 1e-2 | -5.747e+00 | 0.0223 | 138.0 | 3.58% | 445.8 | 2.82% | motif file (matrix) |
svg |
64 |
| ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.744e+00 | 0.0223 | 61.0 | 1.58% | 172.5 | 1.09% | motif file (matrix) |
svg |
65 |
| CHR(?)/Hela-CellCycle-Expression/Homer | 1e-2 | -5.598e+00 | 0.0251 | 320.0 | 8.30% | 1131.0 | 7.16% | motif file (matrix) |
svg |
66 |
| RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer | 1e-2 | -5.442e+00 | 0.0289 | 262.0 | 6.80% | 913.6 | 5.78% | motif file (matrix) |
svg |
67 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.278e+00 | 0.0335 | 35.0 | 0.91% | 89.7 | 0.57% | motif file (matrix) |
svg |
68 |
| Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer | 1e-2 | -5.275e+00 | 0.0335 | 490.0 | 12.71% | 1797.4 | 11.37% | motif file (matrix) |
svg |
69 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.187e+00 | 0.0356 | 290.0 | 7.52% | 1025.6 | 6.49% | motif file (matrix) |
svg |
70 |
| Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer | 1e-2 | -5.181e+00 | 0.0356 | 1114.0 | 28.91% | 4278.8 | 27.07% | motif file (matrix) |
svg |
71 |
| HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer | 1e-2 | -4.942e+00 | 0.0442 | 109.0 | 2.83% | 350.5 | 2.22% | motif file (matrix) |
svg |
72 |
| ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -4.903e+00 | 0.0454 | 29.0 | 0.75% | 72.8 | 0.46% | motif file (matrix) |
svg |
73 |
| STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer | 1e-2 | -4.818e+00 | 0.0487 | 132.0 | 3.43% | 436.9 | 2.76% | motif file (matrix) |
svg |
74 |
| CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-2 | -4.707e+00 | 0.0537 | 76.0 | 1.97% | 234.8 | 1.49% | motif file (matrix) |
svg |